Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKYKIDFSKGLVPAILQDNQTKQVLMLGYMNQEAFDKTIEDGVVCFYSRSKQRLWTKGETSGHTQLVKDIHVDCDNDTILIDVIPNGPTCHTGSQSCFNTEVPFSVQTLAQTVQDSAQSNNEKSYTKYLLTEGIEKITKKYGEEAFEVVIEAIKGDKKAFVSEVADELYHLFVLMHALGVDFSEIEAELARRHHKRNNFKGERQNIEQW
1ZPS Chain:B ((23-110))
-----------LIIAVAQDHETGEVLMVAYMNREALRRTLETGTAHYWSTSRGKLWLKGESSGHVQRVKDVLVDCDGDAVVLKVEQEGGACHTGYRSCF---------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1ZPS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48965 for 615 contacts (-79.6/contact) +
2D Compatibility (PS) -9944 + (NN) -6595 + (LL) 9640
1D Compatibility (HY) -8000 + (ID) 2200
Total energy: -66064.0 ( -107.42 by residue)
QMean score : 0.692
(partial model without unconserved sides chains):
PDB file :
Tito_1ZPS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZPS-query.scw
PDB file :
Tito_Scwrl_1ZPS.pdb
: