Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIYIDKNESPVTPLDE--KTMTSIISATPYNLYPDAAYEQFKEAYAKFYGLSP-EQIIAGNGSDELIQKLMLIM--PEGPALTLNPDFFMYQAYAAQVNREIAFVDAGSDLTFDLETILTKIDEVQPSFFIMSNPHNPSGKQFDTAFLTAIADKMKAL--NGYFVIDEAYLDYGTAY---DVELAPHILRMRTLSKAFGIAGLRLGVLISTAGTIKHIQKIEHPYPLNVFTLNIATYIFRHREETRVFL----TMQRQLAEQLKQIFDTHVADKMSVFPSNANFVLTKGSAAHQLGQYVYEQGFKPRFYDEPV--MKGYVRYSIATASQLKQLEEIVKEWSAKYDLSKTTKHS |
| 3EUC Chain:A ((32-366)) | LVKLDAMENPYRLPPALRSELAARLGEVALNRYPVPSSEALRAKLKEVMQVPAGMEVLLGNGSDEIISMLALAAARPGAKVMAPVPGFVMYAMSAQFAGLEFVGVPLRADFTLDRGAMLAAMAEHQPAIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQESWMSRLTDFGNLLVMRTVSK-LGLAGIRLGYVAGDPQWLEQLDKVRPPYNVNVLTEATALFALEHVAVLDEQAAQLRAERSRVAEGMAAH------GGVTVFPSAANFLLARVPDAAQTFDRLLARKVLIKNVSKMHPLLANCLRVTVSTPEENAQFLEAFAASLQ----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EUC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -198074 for 2602 contacts (-76.1/contact) +
2D Compatibility (PS) -34966 + (NN) -23410 + (LL) 1108
1D Compatibility (HY) -18800 + (ID) 4050
Total energy: -278192.0 ( -106.91 by residue)
QMean score : 0.497
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