Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLTLMKFFVGGFAVLLSYIVSVTLPWKEFGGIFATFPAVFLVSMFITGMQYGDKVAVHVSRGAVFGMTGVLVCILVTWMMLHMTHMWLISIIVGFLSWFISAVCIFEAVEFIAQKRLEKHSWKAGKSNSK
3BRH Chain:A ((216-247))
--------------------------------------------------QEDDSVPICIHSSAGCGRTGVICAIDYTWMLL-------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3BRH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13098 for 135 contacts (-97.0/contact) +
2D Compatibility (PS) -3333 + (NN) -745 + (LL) 9484
1D Compatibility (HY) -3200 + (ID) 650
Total energy: -11542.0 ( -85.50 by residue)
QMean score : 0.011
(partial model without unconserved sides chains):
PDB file :
Tito_3BRH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BRH-query.scw
PDB file :
Tito_Scwrl_3BRH.pdb
: