Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEKAYRIKKNADFQRIYKKGHSVANRQFVVYTCNNKEIDHFRLGISVSKKLGNAVLRNKIKRAIRENFKVHKSHILAKDIIVIARQPAKDMTTLQIQNSLEHVLKIAKVFNKKIK
1D6T Chain:A ((3-117))
LEKAYRIKKNADFQRIYKKGHSVANRQFVVYTCNNKEIDHFRLGISVSKKLGNAVLRNKIKRAIRENFKVHKSHILAKDIIVIARQPAKDMTTLQIQNSLEHVLKIAKVFNKKIK
General information:
TITO was launched using:
RESULT:
Template:
1D6T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62766 for 906 contacts (-69.3/contact) +
2D Compatibility (PS) -12071 + (NN) -1927 + (LL) 0
1D Compatibility (HY) -16000 + (ID) 5700
Total energy: -98464.0 ( -108.68 by residue)
QMean score : 0.577
(partial model without unconserved sides chains):
PDB file :
Tito_1D6T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1D6T-query.scw
PDB file :
Tito_Scwrl_1D6T.pdb
: