Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIQTVVAAAVLYI-------ATAVDLL--------VILLIFFARAKTRKEYRDIYVGQYLGSIILIL-VSLFLAFVLNYVPEKWILGLLGLIPIYLGIKVAIYDDCEGEKRAKKELNEKGLSKLVGTVAIVTIASCGADNIGLFVPYFVTLSVTNLLL-TLFVFLILIFFLV-FTAQK-LANIPGIGEIVEKFSRWIMAIIYIA----------LGLFIIIENDTIQTILGFIF
2AXO Chain:A ((38-266))
AQEAVKGVVELFTSQGCASCPPADEALRKMIQKGDVVGLSYHVDYWNYLGWTDSLASKENTERQYGYMRALGRNGV--YTP-QAILN--GRDHVKGADVRGIYDRLDAFKREGQGLNVPVSSKFAGDEVEIDIGA-GNGKADVVVAYFTREQTVDVKKMSYWHSVYDVQTVGMWDGSPMTVKLP--ASVVAKVKKGGCAVLLQTANASGDPAAIVGASILLGNETQLEHH----
General information:
TITO was launched using:
RESULT:
Template:
2AXO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -184998 for 1299 contacts (-142.4/contact) +
2D Compatibility (PS) -18617 + (NN) 11782 + (LL) 1220
1D Compatibility (HY) 14800 + (ID) 500
Total energy: -176313.0 ( -135.73 by residue)
QMean score : 0.082
(partial model without unconserved sides chains):
PDB file :
Tito_2AXO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AXO-query.scw
PDB file :
Tito_Scwrl_2AXO.pdb
: