Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFNAVVVRKSASNVSYKVEKVDESHLSKGDVLVKVVYSSINYKDMLALQYKGGVIRDYPMIPGIDFAGIVESSSNDKFKEGDNVLVTGYDVGVTHTGGFSEYAQVPGEWIVPIPQEMSIKESMVYGTAGFTAALSIFELEKYGMNIKSQPEILVSGATGGVGSVAIQILHKIGYENITAIVRKEKQIEIAKKLGAKQVIIIED--DNKPLKKGIFDYFLDTVGSNVTLYGLKRLNYQGVATVCGNVAGNSLNANILPFILRGIKLIGIDSVYVDHNIREDIWSKLANEWNIGNSL---LYNEIGFEEFYKTIDQLLKGQHLGRTILKV |
| 3NX4 Chain:A ((2-323)) | --QALILEQQDGKTLASVQHLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKIIRHFPMIPGIDFAGTVHASEDPRFHAGQEVLLTGWGVGENHWGGLAERARVKGDWLVALPAGLSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDG-EVVVTGASGGVGSTAVALLHKLGYQ-VAAVSGRESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAIDTVGDKVLAKVLAQMNYGGCVAACGLAGGFALPTTVMPFILRNVRLQGVDSVMTPPARRAEAWARLVK--DLPESFYAQAATEITLADAPKFADAIINNQVQGRTLVKI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NX4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -236848 for 2917 contacts (-81.2/contact) +
2D Compatibility (PS) -34365 + (NN) -12330 + (LL) 380
1D Compatibility (HY) -23600 + (ID) 6250
Total energy: -313013.0 ( -107.31 by residue)
QMean score : 0.596
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