Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKNKEKYLTNFSEAKRKKATQKYNIIKPFILGEQSLSSISKSKGIALSTLYRWNKSYKEQGLKGLIYATKADKGTRKIEPKIIDEIERLALMNKRNSIATIHRKTTNYCKENNFDIPSYKQIYSVIKAMPKSVIDFSHQGEKYYQNKYDLIQIRESSRPNEIWQADHTLLDIFILDQKGNINRPWLTIIMDDYSRAIAGYFLSFDAPNAQNTALTLHQAIWNKNDTNWPVCGIPEKFYTDHGSDFTSHHMEQVAIDLKINLMFSKVGVPRGRGKIERFFQTVNQTFLEQLPGYINNNDTPSNLINFHNFEEKLRYFLIEDYNQKEHSTIHTTPISRWNSNHFFPNMPSSLEQLDLLLLEIPKSRKVHSDGIHFQGFRYSNTNLAAYVGEYVLIRYNPNDMAEIRVFYRDEFLCTAICPEIADYSIDIKDIQHARSQRRKHLKQNIASPSTTELIKEEKNCGYSPQETTKNVKKLKRYRND |
1CXQ Chain:A ((7-151)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------GLGPLQIWQTDFTLEPR-------MAPRSWLAVTVDTASSAIVVTQHGR--VTSVAAQHHWATAIAV--------LGRPKAIKTDNGSCFTSKSTREWLARWGIAHTTGIPG----QAMVERANRLLKDKIRVLAEGDG-F----MKRIPTSKQGELLA-KAMYALNH------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1CXQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74858 for 1082 contacts (-69.2/contact) +
2D Compatibility (PS) -15644 + (NN) -10074 + (LL) 21092
1D Compatibility (HY) 2800 + (ID) 1700
Total energy: -78384.0 ( -72.44 by residue)
QMean score : 0.454
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