Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MNILFGISDTQECYNAIKFAVKLAHSLKEVRFTLLHVSMEVFIYSESGMMDYGQTEALEEEKAKALLKQFEDAFKKENIECESVLKSGDLIDVVLDMAKDYDLLLIGASESNLLYRLFISHQNSLVEQSSIPVVIAK
3IDF Chain:A ((1-138))
MKKLLFAIDDTEACERAAQYILDMFGKDADCTLTLIHVKPEFMLYGEAVLAAYDEIEMKEEEKAKLLTQKFSTFFTEKGINPFVVIKEGEPVEMVLEEAKDYNLLIIGSSENSFLNKIFASHQDDFIQKAPIPVLIVK
General information:
TITO was launched using:
RESULT:
Template:
3IDF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108941 for 985 contacts (-110.6/contact) +
2D Compatibility (PS) -14747 + (NN) -3549 + (LL) 0
1D Compatibility (HY) -12400 + (ID) 2550
Total energy: -142187.0 ( -144.35 by residue)
QMean score : 0.573
(partial model without unconserved sides chains):
PDB file :
Tito_3IDF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IDF-query.scw
PDB file :
Tito_Scwrl_3IDF.pdb
: