Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKEKPFNSEQMAFLEELLSHQEKHLESKLSGFSVNDLDMQSVFRLERNRLKIAYRLLGLMSFIALVLAIVLISILPLQKTEHHFVDFLNQDKHYAIIQRADKSISSNEALARSLIGAYVLNRESINRIDDKSRYELVRLQSSSKVWQRFEDLIKAQNSIYVQSHLEREVHI-VNIAIYQQDNNPIASVSIAAKLLNENKLVY-EKRYKI-VLSYLFDTPDFDYASMPKNPTGFKITRYSITEIAPTNRND |
4NHF Chain:A ((39-170)) | --------------------------------------------------------------------------------------------------------SYGEVVDRYWLNQYVLNRENYDYDTIQLNYDTTALLSAASVQQEYYKIYDGENA--RDKVLSNKARITVKVRSIQLNGLGQATVRFTTQQLDSSGATTGPKQHQIATIGYTYVGAPMKSSDRLLNPLGFQITSYRSDPEILLN--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NHF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -33374 for 849 contacts (-39.3/contact) +
2D Compatibility (PS) -14168 + (NN) -4729 + (LL) 10172
1D Compatibility (HY) -4800 + (ID) 1600
Total energy: -48499.0 ( -57.12 by residue)
QMean score : 0.391
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