Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFQTKEEWGGFDELEIRYSDKALANTNTLD----------IKDTQMISIALEEVEEVEVKVCCVDSQSIKVGLFKDGQLIYESEVEKL
3ZDT Chain:A ((113-175))
LAHPPEEWKY--ELRIRYLPKGFLNQFTEDKPTLNFFYQQVKNDYMLEIADQVDQEIALKLGCLEIRRSYKKSNYEVLEKDVGLRRFF
General information:
TITO was launched using:
RESULT:
Template:
3ZDT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3473 for 201 contacts (17.3/contact) +
2D Compatibility (PS) -5192 + (NN) -178 + (LL) 56
1D Compatibility (HY) -4000 + (ID) 950
Total energy: -6791.0 ( -33.79 by residue)
QMean score : 0.191
(partial model without unconserved sides chains):
PDB file :
Tito_3ZDT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZDT-query.scw
PDB file :
Tito_Scwrl_3ZDT.pdb
: