Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAEWKTDTEEVKKVVGRCREFKRSLQEEKCSPFIKDLDSYALKIIVERRKTEMQLEKAIGELKKAKSNEDDAKVALRVLQGASVVSWIWPPARIAATAAIVAAEAVLKFMKEDTEKCKRNVELLERMLEIYSNQAKASANLMNQAWEGIKKRLHFYTDKHQEFI-RRLKQASDAIDNEYNFPT---PGVLLEYDFERPAISYTPKKSVFNERLKDLRENFSASLYADLKDKIHH---NALSNDDLERMIAFREQEFEKSLEDWMGAYSYDENPNDELDRMAISKEQELEKSLEDLMPSVLGVPSYNESLTLAKNRCVKNFKEALEGFTEKIKESPNDSNAINEAFDNLETELERATENLSQKIDPVLERNENYTQKALEYREFLESRKESFIVDEKNPYPEEVSFNEWRWAEFDSVFSAIVPLEDLNKTACAHHALKALQATLKDNDLGFDATELEQIAKGFIPRGYLWHFDANVLGNLALVREELLLGVKHTKGYSLWTEFLQKQN |
2YY5 Chain:A ((192-315)) | -----------------------------------------------------------------------------------------------------------------------------RIMDLFDPTKKMSKSSKNQ--NGV-----IYLDDPKEVVVKKIRQATTDSFNKIRFASKTQPGVTNMLTILKALLKEPVNQSLTNQLGNDLEAYFSTKSYLDLKNALTEATVNLLVNIQRKREQISREQVFNCLQAGKNQAQATARTTLALFYDGFGLGSQNIK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YY5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1232 for 745 contacts (-1.7/contact) +
2D Compatibility (PS) -12166 + (NN) -3391 + (LL) 26760
1D Compatibility (HY) -4400 + (ID) 1700
Total energy: 3871.0 ( 5.20 by residue)
QMean score : 0.269
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