Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDRISTETELNWEFVESLNENALSDLEERLEIGFSDAFKDFIKRSNYGFSQLRYFMVGNESYMFKHVLNFNLESLLIDFMQSLK--EWLEPEEIVFANDGYGGYYLWNTTTDVVLFLDTDN---GSKKVL-LNLNMFLKKLESRG
3D5P Chain:A ((12-128))
--------------KDGASSASIDDVEKLLNTTLPKQYKSFLLWSNGGEGKLGD-----NYI---YIWAI---EDVIAYNHDYGIQKYLQKEYWAFGMDGDIGYILHLS-DNSIYRVDLGDLDITSIKYIAPSFDDFLGKAIYLN
General information:
TITO was launched using:
RESULT:
Template:
3D5P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81979 for 779 contacts (-105.2/contact) +
2D Compatibility (PS) -11985 + (NN) -5142 + (LL) 2144
1D Compatibility (HY) -6000 + (ID) 1200
Total energy: -104162.0 ( -133.71 by residue)
QMean score : 0.492
(partial model without unconserved sides chains):
PDB file :
Tito_3D5P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3D5P-query.scw
PDB file :
Tito_Scwrl_3D5P.pdb
: