Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKISRKEYVSMYGPTTGDKVRLGDTDLIAEVEHDYTIYGEELKFGGGKTLREGMSQSNNPSKEELDLIITNALIVDYTG--IYKADIGIKDGKIAGIGKGGNKDMQDGVKNNLSVGPATEALAGEGLIVTAGGIDTHIHFISPQ----QIPTAFASGVTTMIGGGTGPADGTNATTITPGRRNL------------KWMLRAA--EEYSMNLGFL-AK----------G----NASNDAS----LADQIEAGAIGFKIHED----WGTTPSAINHALDVADKYDVQVAIHTDTLNEA--GCVEDTMA--AIAGRTMHTFHTEGAGG------GHAPDIIKVAGEHNILPAS-TNPTIP----FTVNTEAE--HMDMLMVCHHLDKSI-KEDV-----QFAD----------S-R--IRPQTIAAEDTLHDMGIFSITSSDSQAMGRVGEVITRTWQTADKNKKEFGRLKEEKGDNDNFRIKRYLSKYTINPAIAHGISEYVGSVEVGKVADLVLWSPAFFG------------VKPNMIIKGGFIALSQMGDANASIPTPQPVYYREMFAHHGKAKYDANITFVSQAAYDKGIKEELGLERQVLPVKNCRNITKKDMQFNDTTAHIEVNPETYHVFVDGKEVTSKPANKVSLAQLFSIF |
| 3GIP Chain:A ((5-467)) | ---------------------------------------------------------------EKLDFKITGGWIIDGTGAPRRRADLGVRDGRIAAIGELGA-------------HPARHAWDASGKIVAPGFIDVHGHDDLMFVEKPDLRWKTSQGITTVVVGNCGVSAAPAPLPGNT-AAALALLGETPLFADVPAYFAALDAQRPMINVAALVGHANLRLAAMRDPQAAPTAAEQQAMQDMLQAALEAGAVGFSTGLAYQPGAVAQAAELEGLARVAAERRRLHTSHIRNEADGVEAAVEEVLAIGRGTGCATVVSHHKCMMPQNWGRSRATLANIDRAREQGVEVALDIYPYPGSSTILIPERAETIDDIRITWSTPH--PECSGEYLADIAARWGCDKTTAARRLAPAGAIYFAMDEDEVKRIFQHPC-CMVGSDGLPNDARP--HPRLWGSFTRVLGR-YV-----REARLMTLEQAVARMTALPARVFGFA-ERGVLQPGAWADVVVFDPDTVADRATWDEPTLASVGIAGVLVNGAEVFPQPPADGRPGQVLRA------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GIP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101572 for 3104 contacts (-32.7/contact) +
2D Compatibility (PS) -39939 + (NN) -11452 + (LL) 10140
1D Compatibility (HY) -5200 + (ID) 3950
Total energy: -151973.0 ( -48.96 by residue)
QMean score : 0.342
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