Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKAIKILLIMTLSLNAISVNRALFDLKDSQLKGELTPKIVDFGGYKSNTTEWGATALNYINAANGDAKKFSALVEKMRFNSGILGNFRAHAHLRQALKLQKNLKYCLKIIARDSFYSYRTGIYIPLGISLKDQKTAQKMLADLSVVGAYLKKQQENEKAQSPYYRSNNYYNSYYSPYYGMYGMYGMGMYGMYGMGMYDFYDFYDGMYGFYPNMFFMMQVQDYLMLENYMYALDQEEILDHDASINQLDTPTDDDRDDKDDKSSQPANLMSFYRDPKFSKDIQTNRLNSALVNLDNSHMLKDNSLFHTKAMPTKSVDAITSQAKEL-NHLVGQIKEMKQDGASPNKIDS-VVNKAMEVRDKLDNNLNQLDNDLKDQKGLSSEQQAQVDKALDSVQQLSH-SSDVVGNYLDGSLKIDGDDRDDLNDAINNPMQQPAQQTPINNMDNTHANDSKDQGGNALINPNNATNDDHNDDHMDTNTTDTSNANDTPTDDKDASGNNTGDMNNTDTGNTDTGNTDTGNTDDMSNMNNGNDDTGNTNDDMGNSNDMGDDMNNANDMNDDMGNSNDDMGDMGDMNDDMGGDMGDMGDMGGDMGN |
4BL6 Chain:A ((10-89)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IIVSDTMSKLRNELRLLKEDAATFSSLRAMFAARCEEYVTQVDDLNRQLEAAEEEKKTLNQLLRLAVQQKLALTQRLEEMEM------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4BL6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 7687 for 291 contacts (26.4/contact) +
2D Compatibility (PS) -8226 + (NN) -2720 + (LL) 16932
1D Compatibility (HY) -2000 + (ID) 700
Total energy: 10973.0 ( 37.71 by residue)
QMean score : 0.485
|
|
|