Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQYALLFPGQGSQCIGMGKSFYESHTLAKELFERASNVLKVDMKKTLFEENELLKESAYTQPAIYLVSYIAYQLLNKQANGGLKPVFALGHSLGEVSAVSLSGALDFEKALKLTHQRGKMMQEACANKDASMMVVLGVSEESLLSLCQRTKNVWCANFNGGMQVVLAGVKDDLKALEPTLKEMGAKRVVFLEMSVASHCPFLEPMIFKFQELLEKSLKDKFHFEIISNATNEAYHNKSKAVELLSLQLTQPVRYQDCVKSNNDRVDVFFELGCGSVLKGLNKRLSNKPTISVGDNKGLDEAIEFLEEYV |
2H1Y Chain:A ((1-309)) | MQYALLFPGQGSQCIGMGKSFYEGHTLAKELFERASNALKVDMKKTLFEENELLKESAYTQPAIYLVSYIAYQLLNKQANGGLKPVFALGHSLGEVSAVSLSGALDFEKALKLTHQRGKMMQEACANKDASMMVVLGVSEESLLSLCQRTKNVWCANFNGGMQVVLAGVKDDLKALEPTLKEMGAKRVVFLEMSVASHCPFLEPMIFKFQELLEKSLKDKFHFEIISNATNEAYHNKAKAVELLSLQLTQPVRYQDCVKSNNDRVDIFFELGCGSVLKGLNKRLSNKPTISVGDNKGLDEAIEFLEEYV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2H1Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -225247 for 2811 contacts (-80.1/contact) +
2D Compatibility (PS) -33426 + (NN) -15487 + (LL) 0
1D Compatibility (HY) -46000 + (ID) 15250
Total energy: -335410.0 ( -119.32 by residue)
QMean score : 0.613
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