Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFKVVQICGGLGNQMFQYAFAKSLQKHSNTPVLLDITSFDGSNRKMQLELFPIDLPYASAKEIAIAKMQHLPKLVRDALKYMGFDRVSQEIVFEYEPKLLKPSRLTYFYGYFQDPRYFDAISSLIKQTFTLPPPPENGNNKKKEEEYHRKLSLILAAKNSVFAHIRRGDYVGIGCQLGIDYQKKAVEYMAKR--VPNMELFVFCEDLKFTQNLDLGYPFMDMTTRDKDEEAYWDMLLMQSCKHGIIANSTYSWWAAYLINNPGKIIIGPKHWLFGHENILCKEWVKIESHFEVKSQKYNA |
| 4JKY Chain:A ((21-103)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------AKEKGFVHISTGDILREAVQKGTPLGKKAKEYMERGELVPDDLIIALIEEV-FPKHGNVIFDGFPRTV--KQAEALDEMLEKKGLKVDHVLLFEVPDEVVIERLSGRRINPETGEVYHVKYNPPPPGVKVIQREDDKPEVIKKR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JKY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -45729 for 498 contacts (-91.8/contact) +
2D Compatibility (PS) -8434 + (NN) -2632 + (LL) 10992
1D Compatibility (HY) -3600 + (ID) 1300
Total energy: -50703.0 ( -101.81 by residue)
QMean score : 0.269
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