Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRKIVLVAIALLISGCASYKITPEHVTSYNNGIQVMTSTQARSKVQLEIAQSKLK------GLNESPLVLYVAAQVLEGKPVVFSRKAISVSINQTN----LPVLSLRQVMKSSFDFEGILQSFNISVPTAPIDNINMITPPMFYYGQGSFLAYNGMMYGGMGMYGPGFGMMMMDDVEEQEVMQESRQALKILAINYLKKNTLNVENKAKGGFVVVDTKNLKTPGVVVVKVFLEDEIHTFKIDISKM |
1GNL Chain:A ((422-539)) | ----------ILTAGCAKYRYNKLNLGDIGGIPRVLDAGQCNDSYSLAVIALKLKEVFGLEDVNDLPIVYNIAW--YEQKAVIVLLALLSLGVKNIHLGPTLPAFLSPNVAKV------LVEQFNIGGITSPQDDLKAFF----------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GNL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -25527 for 642 contacts (-39.8/contact) +
2D Compatibility (PS) -11123 + (NN) -162 + (LL) 9172
1D Compatibility (HY) -10000 + (ID) 1450
Total energy: -39090.0 ( -60.89 by residue)
QMean score : 0.173
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