Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKGLSIGNKIILCVALIVIVCVSILGVSLNSRVKEILKESALHSMQDSLHFKVKEVQSVLENTYTSMGIVKEMLPEDTKREIKIQLLKNFILANSHVAGVSMFFKDREDLRLTLLRDNDTIKLMENPSLGSNPLAQKAMKNKEISKSLPYYRKMPNGAEVYGVDILLPLFKENTQEVVGVLMIFFSIDSFSNEITKNRSDLFLIGVKGKVLLSANKSLQDKSITEIYKSVPKATNEVMAILENGSKATLEYLDPFSHKENFLAVETFKMLGKTESKDNLNWMIALIIEKDKVYEQVGSVRFVVVVASAIMVLALIIAITLLMRAIVSNRLEVVSSTLSHFFKLLNNQAHSSDIKLVEARSNDELGRMQTAINKNILQTQKTMQEDRQAVQDTIKVVSDVKAGNFAVRITAEPASPDLKELRDALNGIMDYLQESVGTHMPSIFKIFESYSGLDFRGRIQNASGRVELVT--NALGQEIQKMLETSSNFAKDLANDSANLKECVQNLEKASN---SQHKSLMETSKTIENITTSIQGVSSQSEAMIEQGKDIKSIVEIIRDIADQTNLLALNAAIEAARAGEHGRGFAVVADEVRKLAERTQKSLSEIEANINILVQSISDTSESIKNQVKEVEEINASIEALRSVTEGNLKIASDSLEISQEIDKVSNDILEDVNKKQF |
3ZX6 Chain:B ((66-260)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SGASEIATGNNDLSSRTEQQAASLEETAASMEQLTATVKQNAENARQASHLALSASETAQRGGKVVDNVVQTMRDISTSSQ-------KIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSAQAAREIKSLIEDSVGKVDVGSTLVESAGETMAEI---VSAVTRVTDIMGEIASASDEQSRGIDQVGLAVAEMDRVTQQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZX6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2309 for 1063 contacts (2.2/contact) +
2D Compatibility (PS) -20575 + (NN) -6007 + (LL) 37532
1D Compatibility (HY) -7200 + (ID) 3550
Total energy: 2509.0 ( 2.36 by residue)
QMean score : 0.519
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