Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTLFSVYLFLSLNPLFLEAKEITWSQFLENFKNKNEDDKPKPLTIDKNNEKQQILDKNQQILKRALEKSLKFFFIFGYNYSQAAYSTTNQNLTLTANSIGFNTATGLEHFLRNHPKVGFRIFSVYNYFHSVSLS-QPQILMVQNYGGALDFSWIFVDKKTYRFRSYLGIALEQGVLLVDTIKTGSF-TTIIPRTKKTFFQAPLRFGFIVDFIGYLSLQLGIEMPLVRNVFYTYNNHQERFKPRFNANLSLIVSF |
| 2F1V Chain:A ((4-161)) | ----------------------------------------------------------------------GEFFMRAGSATVRPTEG-----GFSVTNNTQLGLTFT--YMAT--DNIGVELLAATPFRHKIGTRATGDIATVHHLPPTLMAQWYFGDA-SSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSWGAAGQVGVDYLINRDWLVNMSVWYMDIDTTANYKLGGAQQHDSVRLDPWVFMFSA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2F1V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -37609 for 1019 contacts (-36.9/contact) +
2D Compatibility (PS) -15252 + (NN) 774 + (LL) 5508
1D Compatibility (HY) -2800 + (ID) 950
Total energy: -50329.0 ( -49.39 by residue)
QMean score : 0.011
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