Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKRIKVGSDLNKKESLLDAFVKTYLQTLEPISSKRLKELANLKVSCATIRNYFQILSKEGMLHQAHSSGARLPTFKAFENYWHKSLRFEV-----------L------KVN---EKRLKSASENFGLFTLLKKPSLE----RLERVIECEK-RFLILDFLAFSCA----VGY-----SVKMEKFLLEL-VGRSVKEVRLIAA-SVNALSLARQLERL--EYSSAQITRFNLMGLKTLLNS-----PLFFDILEGK--VLERFKKGLHFIE---------PDCMLVTRPIEF-QNERMQLLCVGKLECDYEGFFQTISKEE |
| 1STZ Chain:A ((14-321)) | --------KLNDRQRKVLYCIVREYIENKKPVSSQRVLEVSNIEFSSATIRNDMKKLEYLGYIYQPHTSAGRIPTDKGLRFYYEEMLKISKETSEADLAVETFKSMPLADPEKVLFLAGNLLARLTEGYVLIERPNTRDLKILRVMLIPVSEDYLIFSILTEFGVSKVTPIKTQERLNWEEIERQLNFLLRGRTVGEVLMGKIESLKGSGFLRLIESLIGET-VERYLDAGLENLLKDETLTLEDIRNLLEEVKDQKFLESLVGEGITVRIGREIGRKKLEKFAVFSGKYFKGESPIGSVYLFTSKVTKYDRNHRVFEYIL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1STZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139330 for 1781 contacts (-78.2/contact) +
2D Compatibility (PS) -27023 + (NN) -7104 + (LL) 808
1D Compatibility (HY) -11200 + (ID) 2350
Total energy: -186199.0 ( -104.55 by residue)
QMean score : 0.435
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