Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -----------------MAKENLPIVF------------------GPVLSRRF---GKSLGVDLSPSKKQCNYNCIYCELGKAK------------PIERMEEVIKVETLI-----STIQNALNNLTTPIDVLTITANGEPTLYPHLLELIQSIKPFLKGVKTLILSNGSLFYEPKVQQALKEFDI----VKFSLDAIDLKAFERVDKPYSKDINKILEGILSFSQIYQGQLVAEVLLIKGVNDSANNLKLIADFLKKINTARVDLSTIDRPSSFKAPKLSEDELLKCSLFFEGLCVSLPKRSTAQAKKLVSCGIDELLALISRRPLSAEEAPLILDPNAFKHLETLLNHKQITIKKVGSLEFYCAF |
2YX0 Chain:A ((11-342)) | KITVQANPNMPKEVAELFRKQHYEIVGRHSGVKLCHWLKKSLTEGRFCYKQKFYGIHSHRCLQMTPVLAWCTHNCIFCWRPMENFLGTELPQPWDDPAFIVEESIKAQRKLLIGYKPKVDKKKFEEAWNPTHAAISLSGEPMLYPYMGDLVEEFHK--RGFTTFIVTNGTI---PERLEEMIKEDKLPTQLYVSITAPDIETYNSVNIPMIPDGWERILRFLELMRDLPTRTVVRLTLVKGENM--HSPEKYAKLILKARPMFVEAKAYMNRLTINN-MPSHQDIREFAEALVKHLPGYHIEDEYEPSR-----------------------------------VVLIMRDDVDPQGTGVEGRFIKH |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YX0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -80017 for 2070 contacts (-38.7/contact) +
2D Compatibility (PS) -28473 + (NN) -12094 + (LL) 3300
1D Compatibility (HY) -9600 + (ID) 2400
Total energy: -129284.0 ( -62.46 by residue)
QMean score : 0.344
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