Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKRILFFLAATTFLLRAETASATINTTVDPNVMFSESSTGNVKKDRKRVLKSMVDLEKERVKNFNQYSETKMSKGDLSAFGAFFKGSLEDCVEQKICYYEHRNGKVSFVVNDREKFYKHVLKDLGTELSLPLFNWLYKGSDFGALHEQFGDMYDGYIKYLISMVRVSQKEKARKVDAIVLKKMEEQAEKDTKAAFQKRSSGELESHTDSPE---FISSSKT----QNSSNPDLDPMTNANTLKETASKEPETSSKKEKKPKKKRRLSKKEKQQQALQQEFEKQISDSSKSEK
1MH3 Chain:A ((192-504))-------------------------------------------------LTFLVDL----IKNKHMNADTDYSIAE----AAFNKGETAMTINGPWAWSNIDTSKVNYGVT--------VLPTFKGQPSKPFVGVLSAGINAASPNKELAKEF--LENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDAALAAAQTAAAAAISPQARAFLEQVFRRKQSLNSKEKEEVAKKCGITPLQVRVWFINK


General information:
TITO was launched using:
RESULT:

Template: 1MH3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 49349 for 1173 contacts (42.1/contact) +
2D Compatibility (PS) -20694 + (NN) -2260 + (LL) 5028
1D Compatibility (HY) -5200 + (ID) 2400
Total energy: 23823.0 ( 20.31 by residue)
QMean score : 0.208

(partial model without unconserved sides chains):
PDB file : Tito_1MH3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1MH3-query.scw
PDB file : Tito_Scwrl_1MH3.pdb: