Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRILFFLAATTFLLRAETASATINTTVDPNVMFSESSTGNVKKDRKRVLKSMVDLEKERVKNFNQYSETKMSKGDLSAFGAFFKGSLEDCVEQKICYYEHRNGKVSFVVNDREKFYKHVLKDLGTELSLPLFNWLYKGSDFGALHEQFGDMYDGYIKYLISMVRVSQKEKARKVDAIVLKKMEEQAEKDTKAAFQKRSSGELESHTDSPE---FISSSKT----QNSSNPDLDPMTNANTLKETASKEPETSSKKEKKPKKKRRLSKKEKQQQALQQEFEKQISDSSKSEK |
1MH3 Chain:A ((192-504)) | -------------------------------------------------LTFLVDL----IKNKHMNADTDYSIAE----AAFNKGETAMTINGPWAWSNIDTSKVNYGVT--------VLPTFKGQPSKPFVGVLSAGINAASPNKELAKEF--LENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDAALAAAQTAAAAAISPQARAFLEQVFRRKQSLNSKEKEEVAKKCGITPLQVRVWFINK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MH3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 49349 for 1173 contacts (42.1/contact) +
2D Compatibility (PS) -20694 + (NN) -2260 + (LL) 5028
1D Compatibility (HY) -5200 + (ID) 2400
Total energy: 23823.0 ( 20.31 by residue)
QMean score : 0.208
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