Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -METLHNALLKWYEEFGRKDLPFRNLKGINAPYEVYISEVMSQQTQISTVIERFYPPFLKAFPTLKDLANAPLEEVLLLWRGLGYYSRAKNLKKSAEICVKEHHSQLPNDYQSLLKLPGIGAYTANAILCFGFREKSACVDANVKRVLLRLFGLDPNIH----AKDLQIKANDFLNLNESFNHNQALIDLGALICSPK-PKCAICPFNPYCLGKNHLERHTLKKKQEIIQEERYLGVVIQNNQIALEKIEQKLYL-GMHHFPNL-------KENLE-------FKLPFLGTIKHSHTKFKLNLNLYLATTKD---LKNPIRFYSLKDLETLPISSMTLKILNFLKQKNLFGG |
| 1RRQ Chain:A ((12-362)) | PAREFQRDLLDWFARE-RRDLPWRKDRD---PYKVWVSEVMLQQTRVETVIP-YFEQFIDRFPTLEALADADEDEVLKAWEGLGYYSRVRNLHAAVKEVKTRYGGKVPDDPDEFSRLKGVGPYTVGAVLSLAYGVPEPAVNGNVMRVLSRLFLVTDDIAKCSTRKRFEQIVREIMAYENPGAFNEALIELGALVCTPRRPSCLLCPVQAYCQAFAEGVAEELPVKMVKQVPLAVAVLADDEGRVLIRKRDSTGLLANLWEFPSCETDGADGKEKLEQMVGLQVELTEPIVSFEHAFSHLVWQLTVFPGRLVHGGPVEEPYRLAPEDELKAYAFPVSHQRVWREYKEWAS--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RRQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166561 for 2518 contacts (-66.1/contact) +
2D Compatibility (PS) -34074 + (NN) -16467 + (LL) 332
1D Compatibility (HY) -23200 + (ID) 4700
Total energy: -244670.0 ( -97.17 by residue)
QMean score : 0.476
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