Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDFLNDHINVFGLIAALVILVL-TIYESSSLIKEMRDSKSQGELMEN-GHLIDGIGEFANNVPVGWIASFMCVIVWAFWYFFFGYP------------LSSFSQIGQYNEEVKAHNQKFE---AKWKHLGQKEL------VDMGQGIFLVHCSQCHGITADGLHG---SAQNLLRWDKEEG-IMDTIKHGSKGMDYPAGEMPAI--EMDEKDAKAIASYVMAELSSVKKTKNPQL-IDKGKELFESMGCAGCHGNDGKG---LQENQVFAADLTTYGTE-SFLRNILTHGKKGNIGRMPSFKYKNFSDLQVKALVEFIKSLKPLED |
| 3MK7 Chain:C ((9-301)) | ----------------IALLTLGTIVALFWLIFATRKGESAGTTDQTMGHAFDGIEEYDNPLPRWWFLLFIGTLVFGILYLVL-YPGLGNWKGVLPGYEGGWTQEKQWEREVAQADEKYGPIFAKYAAMSVEEVAQDPQAVKMGARLFANYCSICHGSDAKGSLGFPNLADQDWRWGGDAASIKTSILNGR------IAAMPAWGQAIGEEGVKNVAAFVRKDLAGLPLPEGTDADLSAGKNVYAQT-CAVCHGQGGEGMAALGAPKLNSAAGWIYGSSLGQLQQTIRHGRN---GQMPA-QQQYLGDDKVHLLAAYVYSLSQ--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MK7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -70783 for 1619 contacts (-43.7/contact) +
2D Compatibility (PS) -27013 + (NN) -11283 + (LL) 1088
1D Compatibility (HY) -16400 + (ID) 4050
Total energy: -128441.0 ( -79.33 by residue)
QMean score : 0.330
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