Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKGLWLVISLVFVGFLWANESYVFNNSKGRLTEKSVAFIEGVSKELYLKTGVRFAIDMTDFEKNPIALANKKERQSYQEGFLKQLKPPFVVFFFYHDAQKIELVA--NPKDLL-D--TDKIFFEKIAPLLPTNAKEYTPQRISAMLINGYSVAVDALAEKYHVNITQNFSAPKGVTFVKVVIYILLLTLLGAFLGLYFFKKS
2KW7 Chain:A ((17-150))
------------------STRLVTDEAG-LLSNAQEEVMNGRLRAIRSSHAVEFAVVTLPSIG-DAPLEDFTLKLARQWGVGNEKNNNGLLLVLVLDQRRVRFETGYGLEGYLPDGLLSRIIHDRMIPHFRSG-------NYAEGLSEGVLAVQQVLDGSLEHHHHHH----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2KW7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77946 for 1016 contacts (-76.7/contact) +
2D Compatibility (PS) -13857 + (NN) -6663 + (LL) 5296
1D Compatibility (HY) -4400 + (ID) 850
Total energy: -98420.0 ( -96.87 by residue)
QMean score : 0.666
(partial model without unconserved sides chains):
PDB file :
Tito_2KW7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KW7-query.scw
PDB file :
Tito_Scwrl_2KW7.pdb
: