Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLKKMIGLVAVLSVLLARDNPFEPEINSKNLQGGFSGIYDDYLKEIHVDLPTSARILKKITLTYQDIDGSIH-----SKVVGIDKSIDWHYPLKLSQHTLNQDAFEKRYQIQDFDFLMANNTMILRSPYKILRSFVLVNPYRIVLDTQKGPLDIYQNMDLNQKFFSHIKVGTHKDYYRITLILDGKYRYLLEEKNGAYELKLK |
1XG8 Chain:A ((38-80)) | ----------------------------------------------------------SFKYTYIDITKD--LTDHDLQFIERIEQDELFYPLITMNDEYVADGYIQTKQITRFIDQKLVNE--------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XG8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6904 for 142 contacts (-48.6/contact) +
2D Compatibility (PS) -3675 + (NN) -1356 + (LL) 10204
1D Compatibility (HY) -2800 + (ID) 350
Total energy: -4881.0 ( -34.37 by residue)
QMean score : 0.327
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