Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MLSRDIVQYSKIRTELYAYLTYLFSHNIRNHLPEITLDYLNRQISKMQAEIKMAKSFFVLDAKGMLMLKPSQFKEQGHKEGLLEHDLTEGIELESHVSFSDKYYFYQAVNEKRCILTDPYPSKKGNHLVVSASYPVYDQNNDLAFVVCLQIPLRVAIEISSPSKYFKTFSEGSMVMYFMISIMLTLVSLLLFVKCISSFWTAIVHFSSFDIKEVFHPIVLLTLALATFDLVKAIFEEEVLGKN-SGDNHHAIHRTMIRFLGSIIIALAIEALMLVFKFSVSEPDKITYAVYLAIGVAVLLISLAIYVKFAYSVLPKRER- |
| 3C8C Chain:A ((1-240)) | SLRSMVSDSVDEIVDGVSKTTAEVINGRKSIAQYATSLIENNPEPDNVRTIISQPLIKNTFLLVGFGLEKDGSNINNDPSW------------------NPGPTWDPRVRPWYKDAKNAGKLVITAPYADSASGEILVSVATPVKDSATG--------------------------------QFLGSIFYDVSLAELAELVNEVKLFDAGYVFIVSEDGTTIAHP------------------KKEFNGKPMSEFLGESKINVDT--------------------HQVIINGKPYAVSFSDVEGEDWYVGVVIDEEIAYAALDELRRS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C8C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -200827 for 1812 contacts (-110.8/contact) +
2D Compatibility (PS) -25263 + (NN) -10770 + (LL) 8860
1D Compatibility (HY) 400 + (ID) 2000
Total energy: -229600.0 ( -126.71 by residue)
QMean score : 0.290
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