Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGRAFEYRRAAKEKRWDKMSKVFPKLAKAITLAAKEGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKRASSKEGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEFMFNRKSVFECLKSEVENLKLSLEDLEFALIDYGLEELEEVGDKIIIRGDYNSFKLLNEGFESLRLPIIKAGLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNIE
1MW7 Chain:A ((21-240))
--------------------KVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKRASSKEGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEFMFNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKIIIRGDYNSFKLLNEGFESLKLPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNIE
General information:
TITO was launched using:
RESULT:
Template:
1MW7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91903 for 1652 contacts (-55.6/contact) +
2D Compatibility (PS) -24186 + (NN) -13107 + (LL) 1752
1D Compatibility (HY) -29600 + (ID) 10700
Total energy: -167744.0 ( -101.54 by residue)
QMean score : 0.812
(partial model without unconserved sides chains):
PDB file :
Tito_1MW7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MW7-query.scw
PDB file :
Tito_Scwrl_1MW7.pdb
: