Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAGRMELKNIISETLNEIEKMAKTIDDGFNTAQKTPSFFKTPSHLQNTPNSKNANTPLEPKNAAKIETQEKITEEKEEAKEIITEEIVQENPTQALIPNERVFLKGLLERTLVLFKGMQALEEKEALKRLDLVARFLQYQLSVLEKRLESLERENTE
3S4U Chain:A ((258-298))
-------------------------------------------------------------------------------------------------------------RQLALFKEMQSVKDNKGLNEQDKLAK-----TTAIQAQLDDLDRLNNA
General information:
TITO was launched using:
RESULT:
Template:
3S4U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5037 for 209 contacts (-24.1/contact) +
2D Compatibility (PS) -4590 + (NN) -4165 + (LL) 8168
1D Compatibility (HY) -2000 + (ID) 700
Total energy: -8324.0 ( -39.83 by residue)
QMean score : 0.642
(partial model without unconserved sides chains):
PDB file :
Tito_3S4U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3S4U-query.scw
PDB file :
Tito_Scwrl_3S4U.pdb
: