Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPLETITLAHIYEEQGFFEEALQIYTNILK---KTPDNTEALKQMKRLEKIQKNCAPFKHDALLKQHYLN-FIK-------GDRLSVENLEKWLVEWN
1JPL Chain:A ((46-112))
-------------------EGPQIAVRLLAHKIQSPQEWEALQALTVLEACMKNCGRRFHNEVGKFRFLNELIKVVSPKYLGDRVSEKVKTKVIELLY
General information:
TITO was launched using:
RESULT:
Template:
1JPL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4826 for 297 contacts (-16.2/contact) +
2D Compatibility (PS) -6234 + (NN) -6175 + (LL) 1840
1D Compatibility (HY) -4000 + (ID) 1150
Total energy: -20545.0 ( -69.18 by residue)
QMean score : 0.576
(partial model without unconserved sides chains):
PDB file :
Tito_1JPL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JPL-query.scw
PDB file :
Tito_Scwrl_1JPL.pdb
: