Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDNYTYSELLKSLQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKMKNSLDESVELFELAQNDSDEVTLSLLYEEAPTLEHSVQKVEIEIMLSGENDASNAIITIQPGAGGTESQDWASILYRMYLRWAERKSFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEEKSEIGWGHQ---IRSYVLAPYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAKA |
1RQ0 Chain:A ((32-317)) | -----------------------------------------------------------------IEEIENITNRIKETQEFIELLREEGENELEIEKYEKE--LDQLYQ--ELLFLLSPEA-SDKAIVEIRPGTGGEEAALFARDLFRMYTRYAERKGWNLEVAEIHETDLGGIREVVFFVKGKNAYGILKYESGVHRVQRVPVTESGGRIHTSTATVAVLPEIEEK-DIEIRPEDLKIETFRASG----YVNKTESAVRITHLPTGIVVSCQNERSQYQNKQTALRILRARLYQLQKEQKEREISQ----------RSEKIRTYNF-PQNRVTDHRINYTSYRLQEILDGDLDEIISKLIEHDI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RQ0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38550 for 1943 contacts (-19.8/contact) +
2D Compatibility (PS) -29958 + (NN) -20805 + (LL) 5800
1D Compatibility (HY) -21600 + (ID) 5750
Total energy: -110863.0 ( -57.06 by residue)
QMean score : 0.400
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