Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MISFKEALKIHSNIPLKPLEVEVVSLFESAGRILAEDIICVHALPKFNQSAMDGYGFKMQDLG--QKTQVIQHIFAGDDVSALEVKENECVKIMTGAMVPKGIETIVPIECMLESHKDFALAPKDFKIHANIRQKGENASLNSVLVPKNTRLNYGHIALIASQGFKEIKAFRKLKIALFSSGDELVPLGQNALECQVYDVNSVGVFNMLK--NYNTHFLGVLKDDK-NLQLKILE-LQGYDVILSSAGVSVGDKDFFKDALKERNALFYYEKVNLKPGKPVTLAQLNQSIIIGLPGNPLSCLLVLRVLILPLLERLSLNKDFKL-KPFKAQINAPLKLNNKRTHLILGNYS-N--H--QFIPYNNRYESGAIQALAQVDSIALIDEGVGLV-QGE-IEILRFEN |
| 1G8L Chain:A ((7-405)) | LMSLDTALNEMLSRVTPLTAQETLPLVQCFGRILASDVVSPLDVPGFDNSAMDGYAVRLADIASGQPLPVAGKSFAGQPYH-GEWPAGTCIRIMTGAPVPEGCEAVVMQEQTEQ-MDNGVRFTAEVRSGQNIRRRGEDISAGAVVFPAGTRLTTAELPVIASLGIAEVPVIRKVRVALFSTGDELQLPGQPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIRDDPHALRAAFIEADSQADVVISSGGVSVGEADYTKTILEELG-EIAFWKLAIKPGKPFAFGKLSNSWFCGLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVRTASRLKKTPGRLDFQRGVLQRNADGELEVTT-TGHQGSHIFSSFSLGNCFIVLERDRGNVEVGEWVEVEPFNA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G8L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -214110 for 3056 contacts (-70.1/contact) +
2D Compatibility (PS) -40528 + (NN) -7984 + (LL) 352
1D Compatibility (HY) -19200 + (ID) 6400
Total energy: -287870.0 ( -94.20 by residue)
QMean score : 0.423
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