Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKNILNLALVGALSASFLMAKPAHNANNSTHNTKETTDASAGVLATVDGRPITKSDFDMIKQRNPNFDFDKLKEKEKEALIEQAIRTALVENEAKAEKLNQTPEFKAMMEAVKKQALVEFWAKKQAEEVKKIQIPEKEMQDFYNANKDQLFVKQEAHARHILVKT-----------EDEAKRIISEIDKQPKAKKEAKFIELANRDTIDPNSKNAQNGGDLGKFQKNQMAPDFSKAAFALTPGDYTKTPVKTEFGYHIIYLISKDSPVTYTYEQAKPTIKGMLQEKLFQERMNQRIEELRKHAKIVINK |
2JZV Chain:A ((144-241)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------ASHILIKVKSKKSDKEGLDDKEAKQKAEEIQKEV-SKDPSKFGEIAKKESMDTGS--AKKDGELGYVLKGQTDKDFEKALFKLKDGEVSEV-VKSSFGYHIIKADK---------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JZV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19525 for 608 contacts (-32.1/contact) +
2D Compatibility (PS) -9332 + (NN) -4919 + (LL) 16680
1D Compatibility (HY) -5600 + (ID) 1950
Total energy: -24646.0 ( -40.54 by residue)
QMean score : 0.487
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