Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKVYLRKIDNQILHNKRISIKKGILEHFFDKANNQDEVDMSGILSNYNDKVSILLATDPRLGGGIKRIISAEVDKIKENRLDYELKIDDILLFTYISYKKYTLEIILLADTRYNVLNGLINNSKHLLVFSENETRTLDDGKINESVRIDGGKNIILYGVPGSGKSYTLQRDYCNNSV-VEKIV-FHPDYSYSDFVGQIMPSVDDSGIVSYKFNPGPFTNILKKAYHNPQTKHVLVIDEINRGNVPAIFGEIFQLLDRLKHDKDGFKKGSSEYAINNTDIANIVHNDKNASIRIPSNLWIVATMNTSDQNVFTLDTAFQRRFSMQLVENSFENVDDDFKNMKILDTDMTWQKFCTTINEKIAQNNEGLSSMEDKRFGVYFVSIDDLKSKENFAHKVIKYLWDDVFKFDRNIIFNTTKFNTLEAVVKNFIKEKDRTQFDVFSDDIKELLFNV
3NBX Chain:X ((21-177))---------------------------------------------------------------------------------------------------------------------------EKGLYERSHAIRLCLL-A------ALSGESVFLLGPPGIAKSLIARRLKFAFQNARAFEYLMTRFSTPEEVFGPLS------------------ERLTSGYL---PEAEIVFLDEIWKAGP-AILNTLLTAINERQFR------------------------NGAHVEKIPMRL-LVAASNELPEAD-SSLEALYDRMLIRLWLDKVQDKANFRSMLTSQQDENDNPVPDALQVTDEEYERWQKEIGEITLPDHVFELIFMLRQQLDKLPDAPYVSDRRWKKAIRLLQASAFFSGRSAVAPVDLILLKDCLWYDAQSLNLIQQQIDV


General information:
TITO was launched using:
RESULT:

Template: 3NBX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46258 for 1085 contacts (-42.6/contact) +
2D Compatibility (PS) -15949 + (NN) -3906 + (LL) 9840
1D Compatibility (HY) -5600 + (ID) 1250
Total energy: -63123.0 ( -58.18 by residue)
QMean score : 0.286

(partial model without unconserved sides chains):
PDB file : Tito_3NBX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NBX-query.scw
PDB file : Tito_Scwrl_3NBX.pdb: