Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLQRPKIVAELSANHNQDLNLAKESLHAIKESGADFVKLQTY-TPSCMTLDSKEDPFIIQGTLWDKENLYGLYQKASTPLEWHAELFELAKKLDLGIFSSPFSSKALELLESLDCPMYKIASFEIVDLDLIEKAARTQKPIILSSGIATHAELQDAISLCRGVNNFDITLLKCVSAYPSKIEDAHLLSMVKLGETF-GVKFGLSDHTIGSLCPILATTLGASMIEKHFILNKSLQTPDSAFSMDFNGFKSMVGAIKQSVLALGEEEPKINPKTLEERRFFARSLFVIKDIQKGEALTSDNIKALRPNLG-LHPKFYKEILGQKASKFLKANTPLSADDIERAL |
| 1XUU Chain:A ((18-349)) | --HEPLIICEIGINHEGSLKTAFEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQ---VIPGNA--DVSIYEIMERCALNEEDEIKLKEYVESKGMIFISTPFSRAAALRLQRMDIPAYKIGSGECNNYPLIKLVASFGKPIILSTGMNSIESIKKSVEIIREAG-VPYALLHCTNIYPTPYEDVRLGGMNDLSEAFPDAIIGLSDHTLDNYACLGAVALGGSILERHFTDRMDRPGPDIVCSMNPDTFKELKQGAHALKLARGGKKDTIIAGEKPTKDFAFASVVADKDIKKGELLSGDNLWVKRPGNGDFSVNEYETLFGKVAACNIRKGAQIKKTDIE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XUU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156047 for 2629 contacts (-59.4/contact) +
2D Compatibility (PS) -35409 + (NN) -18429 + (LL) 720
1D Compatibility (HY) -14800 + (ID) 5100
Total energy: -229065.0 ( -87.13 by residue)
QMean score : 0.538
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