Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNYIDLALLVVVVAFGIRGFYHGFVSEIAATLGIVLGVYLASRYSVAVGNLFSEHLYDLRNETMTNLIGFLLVLASIWVFFLALGVLLGKMLVFSGLGIIDKALGFIFSCL---KTFLVLSF-ILYALSKMD---LMKDANAYLQEKSAIF-PTMKSVASKIMRLDGVKHVEKNLKDNLEEMSDEVKNKGSIDNAKESFNKATDKGVEALKEKAKDLPKNMLEPKHNKPNQTPPIPTPSNKEPL |
4WIT Chain:A ((598-719)) | -----------------------------------------------------------------------------------------------------KAWGLLLSILFAEHFYLVVQLAVRFVLSKLDSPGLQKERKERFQTKKRLLQENLGQDA---AAAPGIEHSEKITREALEEEARQASI---------EMFWQRQRGMQETIEIGRRMIEQQLAAG------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4WIT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 548 for 394 contacts (1.4/contact) +
2D Compatibility (PS) -11109 + (NN) -7671 + (LL) 9468
1D Compatibility (HY) -5600 + (ID) 1300
Total energy: -15664.0 ( -39.76 by residue)
QMean score : 0.279
|
|
|