Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTTIKEIFQEEGYSIPNYQRDYAWKDKNFRDLWEDLEEAIEYNKKGYGHFIGTMVVAKNEDNKKLYDIIDGQQRTTTIFMLLHVLVSKQYEEDKRETRKYLYQKGELKLEVASQNQSFFKTLLEVAEKGNISHCEKDADTEGKQNLFEVLKAILDKISKLSEEEVNERLEVLLKMVLMRLEEPDPGKAIRTFQSVNDRGVPLLLLDKLKSLLIYYSNTFCDGKRGLDQFIIDHFGEIFKIFAKIKKSNHISSVGGPEFNEGDIFRYHAGSQRFDGIEFLGHYRTSTDNTYEKLKAELKEIKKSKLKSFIQSYVSDLKNFYQAFLDLLSEIDTNPTTLKVMLINRINPLFFNSLIRLKINNELDDETLKLFAKTDIVCFKSTRYMQSAAYNLINAYLRKGKEGLKSGMIAQCRNDIELAFRQSVNEAFNSSCFHYIFFEKNCQEMGLADLKKLIPGKQFSQEKEHIIPINLLDLDNEIEIQKLGFEDRKDLRAYIYTYGNLISLEKPLNIKGKDKDLYEKDEIYKSSEIPFNRRFNVKGFNKKVLITRNDEMQEWLIDTFFKDFATH |
1N7O Chain:A ((455-524)) | --------------------------------------------------------------------------------------------------------------------------LMDMSRGRSISR----ANSEGHVAAVEVLRGI-HRIADMSEGETKQRLQSLVKTIVQSDSYYDVFKNLKTYKDIS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1N7O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2434 for 409 contacts (-6.0/contact) +
2D Compatibility (PS) -7486 + (NN) -8155 + (LL) 34524
1D Compatibility (HY) -4800 + (ID) 1050
Total energy: 10599.0 ( 25.91 by residue)
QMean score : 0.291
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