Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLEKLIERVLFATRWLLAPLCIAMSLVLVVLGYVFMKELWHMLSHLDTISETDLVLSALGLVDLLFMAGLVLMVLLASYESFVSKLDKVDASEITWLKHTDFNALKLKVSLSIVAISAIFLLKRYMSLEDVLSSIPKDTPLSHNPIFWQVVIHLVFVCSALLTAVTNNIAFSQKERH
3P03 Chain:A ((423-521))
------------------------------------------------------------------IMGIIAMILLGTF--FITSADSASTVMGTMSQHGQLEANKWVTAAWGVA-----------------SNLQNVTIVAATP-FLFVVIGLMF---ALVKDLSNDVIYLEYREQ
General information:
TITO was launched using:
RESULT:
Template:
3P03.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16427 for 369 contacts (-44.5/contact) +
2D Compatibility (PS) -8580 + (NN) -5498 + (LL) 10068
1D Compatibility (HY) -8000 + (ID) 1200
Total energy: -29637.0 ( -80.32 by residue)
QMean score : 0.097
(partial model without unconserved sides chains):
PDB file :
Tito_3P03.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P03-query.scw
PDB file :
Tito_Scwrl_3P03.pdb
: