Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVPDRRVSKTRAAKRRTHYSVKLAKPV-KAKDGTWKLP-----HHINKFTKEY
2JNY Chain:A ((8-35))
------------------------LEVLACPKDKGPLRYLESEQLLVNERLNLA
General information:
TITO was launched using:
RESULT:
Template:
2JNY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 9425 for 88 contacts (107.1/contact) +
2D Compatibility (PS) -2251 + (NN) -691 + (LL) 2052
1D Compatibility (HY) 400 + (ID) 150
Total energy: 8785.0 ( 99.83 by residue)
QMean score : 0.424
(partial model without unconserved sides chains):
PDB file :
Tito_2JNY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JNY-query.scw
PDB file :
Tito_Scwrl_2JNY.pdb
: