Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIVIDLMGADHGVLPIIEGVSRALENKSF-SVVLVGDKDKATPFISKELASKVEMIHTQDYIKMEEAATEAIKRK-ESSIYLGMDILKNG-ADALISAGHSGATMGLATLRLGRIKGVERPAICTLMPSVGKRPSVLLDAGANTDCKPEYLIDFALMGYEYAKSVLHYDSPKVGLLSNGEEDIKGNTLVKETHKMLKAY--DFFYGNVEGSDIFKGVVDVVVCDGFMGNVVLKTTEGVASAIGSIFKDEIKSSFKSKMGALMLKNAFGILKQKTDYAEYGGAPLLGVNKSVIISHGKSNARAVECAIYQAISAVESQVCLRITQAFESLKSQSFESQSDQQDA |
| 1VI1 Chain:A ((1-333)) | LRIAVDAMGGDHAPKAVIDGVIKGIEAFDDLHITLVGDKTTIESHLTTTS-DRITVLHADEVIEPTDEPVRAVRRKKNSSMVLMAQEVAENRADACISAGNTGALMTAGLFIVGRIKGIDRPALAPTLPTVSGDGFLLLDVGANVDAKPEHLVQYAIMGSVYSQQVRGVTSPRVGLLNVGTEDKKGNELTKQTFQILKETANINFIGNVEARDLLDDVADVVVTDGFTGNVTLKTLEGSALSIFKMMRDVMTSTL-------VLKPKLKEMKMKMEYSNYGGASLFGLKAPVIKAHGSSDSNAVFRAIRQAREMVSQNVAALIQEEVKEEKTDE---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VI1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 21331 for 2674 contacts (8.0/contact) +
2D Compatibility (PS) -31744 + (NN) 8606 + (LL) 1388
1D Compatibility (HY) 15200 + (ID) 1350
Total energy: 13431.0 ( 5.02 by residue)
QMean score : 0.092
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