Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------------------MKKVVFLLLFMLGGLEAHSDYCSDHCEGTPDSRIPPMGFHFSFVHSVKYYLQDPQKRDHKLEKCHKAFDSTLKVNFITK------SFKKDCKHAQMALEQAQKETP
1FAZ Chain:A ((1-122))
APADKPQVLASFTQTSASSQNAWLAANRNQSAWAAYEFDWSTDLCTQAPDN---PFGFPFNTACARHDFGYRNYKAAGSFDANKSRIDSAFYEDMKRVCTGYTGEKNTACNSTAWTYYQAVKIFG
General information:
TITO was launched using:
RESULT:
Template:
1FAZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16292 for 629 contacts (-25.9/contact) +
2D Compatibility (PS) -10466 + (NN) -8926 + (LL) 164
1D Compatibility (HY) 1600 + (ID) 800
Total energy: -34720.0 ( -55.20 by residue)
QMean score : 0.310
(partial model without unconserved sides chains):
PDB file :
Tito_1FAZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FAZ-query.scw
PDB file :
Tito_Scwrl_1FAZ.pdb
: