Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQEIIPIVVAFDNNYCIPAGVSLYSMLVHAKRERERVKLFYQIHCLVEDLSLENIAKLEETIAPFSAFSSIEFLDITDKELEPRHNYYKLDPLIAGEIKKLYLKLNAFSQKRFSKMIMCRFFFASLFPQYDKMIMFDVDTLFVGDISESFFIPLGTHYFGAVREKDLIAMDRNSAKDLYELRQMHAKSIGIADAFPNLEETQILFDNYFNAGFLALNLKSWRKENLENQLIEFFLLKNEKLLFNDQDALCFVCRGRILELPYSYNAHPSFLDTP---------S--FPSIKEACMLHFWG-DKPWKLLSV-IGAKKWHEALIQTPFKDAYFNAPFLDHLFESLQNKDKETQEIHAFNKALSFSDKRYSFEFLLPRLSSKLLVGFSLFKIKRKAKRLVKKMLKVFFKI |
| 1G9R Chain:A ((1-277)) | ----MDIVFAADDNYAAYLCVAAKSVEAAHPDT------EIRFHVLDAGISEANRAAVAANLRGGG--GNIRFIDVNPEDFAG--------------F--------PLNIRHISITTYARLKLGEYIADCDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGASIDLFVER--QE----------GYKQKIGM-----------ADGEYYFNAGVLLINLKKWRRHDIFKMSSEWVEQYKDVMQYQDQDILNGLFKGGVCYANSRFNFMPTNYAFMASRHTDPLYRDRTNTVMPVAVSHYCGPAKPWHRDCTAWGAERFTELAGSLTTVPEEWRGKL------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G9R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -228738 for 2200 contacts (-104.0/contact) +
2D Compatibility (PS) -26913 + (NN) -4151 + (LL) 10608
1D Compatibility (HY) -9600 + (ID) 2800
Total energy: -261594.0 ( -118.91 by residue)
QMean score : 0.447
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