Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHGFFLSAFEYQVSARVGSFSRIAFNQSIINSKKGIYPTGSYVTTTGALQVDSSLLPKGIENHKLGFGVGGEIGALAYDSTKFLIDEANPKAGFQPANWYYMGRWEGYLMQHSQNWTREQKAQNARPYVLYNLYLDYQYKDIFGIKLGRYPSKALFLSGF--------NQGFEIFYRWKK-FKIVWFSTFGRALANEQYIRDFYAPVNYKQKINYGMHNFNLVYEN-KYIRIAPFIWFYPKNFNAPGFEITHDTKSYWKSLWRIQTTFYAWFPLYSDYLSKDYYRAALVGKKSAALFVFQRVNFRSYRFGWSVYKNFGNASV-QLGWNGSPIDPFYDTKDDTPYEDAY---SNFYNANSITINAFIGKSIKN-----LLVQLYGKLTY-------SPRADAQSLGVTFKYNLK----KHIYFMLMVNGYQITMHKGYKVGFFTSGYNPDFAQTIQNRSYLMSSMSYRF |
| 2Y0H Chain:A ((88-372)) | ----------------------------------------------------------------------------------------------------------------------------DDYSHLG-LTAKLRYS-QTQLQVGILMPQLPVAFRDDVRLLPQTFDGALLTSSEIEGLTLTAGQLWKSRTRE---SDDMYIMGRDKAHASDEFNLAGATYAFTPRLSASYYYGQLKDIYRQHYLGLLHTLPLG--EGLSLRSDL-----RYFDSGEDGA--AISGPVDNRNLNAMLTLRAGAHAFGIGVQKMIGNDAFPVLNGYTT------------PYVANLMAYQTFTRPQEKSWQLRYDYDFAGLGLPGLNLMTRYVQGRDIDRGAGRADDSEWERNTDLSYVIQSGPLKSVALKWRNITYRSRYGADLDENRFIVNYTLKLW----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y0H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -70166 for 1861 contacts (-37.7/contact) +
2D Compatibility (PS) -26774 + (NN) 35 + (LL) 8040
1D Compatibility (HY) 3200 + (ID) 1400
Total energy: -87065.0 ( -46.78 by residue)
QMean score : 0.147
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