Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDALEITQKLISYPTITP--KECGIFEYIKSLFPAFKTLECEKNGVKNLFLYRIFNPLKKHAEKEHAKEKHVKENVKPLHFCFAGHIDVVPPG--NNWQSDPFKPIIKEGFLYGRGAQDMKGGVGAFLSASLNFNPKTP---FLLSILLTSDEEGPGIFGTRLMLEKLKEKDLLPHMAIVAEPTCEKVLGDSIKIGRRGSINGKLILKGVQGHVAYPQKCQNPIDTLASVLPLISGVHLDNGDECFDPSKLVITNLHAGLGANNVTPGSVEIAFNARHSLKTTQESLKEYLEKVLKD--LPYTLELESSSSPFITASHSKLTSVLQENILKTCHTTPLLNTKGGTSDARFFSAHGIEVVEFGAINDRIHAVDERVSLKELELLEKVFLGVLEGLSEK |
| 4PQA Chain:A ((6-375)) | --SLELAKELISRPSVTPDDRDCQKLLAERLHKIGFAAEELHFGDTKNIWLRR---------------------GTKAPVVCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLYGRGAADMKTSIACFVTACERFVAKHPNHQGSIALLITSDEEGDALDGTTKVVDVLKARDELIDYCIVGEPTAVDKLGDMIKNGRRGSLSGNLTVKGKQGHIAYPHLAINPVHTFAPALLELTQEVWDEGNEYFPPTSFQISNINGGTGATNVIPGELNVKFNFRFSTESTEAGLKQRVHAILDKHGVQYDLQWSCSGQPFLTQA-GKLTDVARAAIAETCGIEAELSTTGGTSDGRFIKAIAQELIELGPSNATIHQINENVRLNDIPKLSAVYEGILARLL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PQA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154258 for 3145 contacts (-49.0/contact) +
2D Compatibility (PS) -38519 + (NN) -20509 + (LL) 1956
1D Compatibility (HY) -19600 + (ID) 7400
Total energy: -238330.0 ( -75.78 by residue)
QMean score : 0.465
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