Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENHLHADTNTDDKSTKIVRLFGLIGGALIALIIYYALDAQMPHIVEEIPKLSSLNYKAMP----VVAGVAVL--MGIWWMTEAIDLPATALLPLVLFNVFSVDQFSSVSASYASPIIFLFMGGFILALSMQKWNLHTRIALSIILLVGTSPRRLILGFMIATGFLSMWVSNTATAVMMFPVGMSVLQLVAKLVGKENASNAFYQKEEITKAHGGIMSNIVHKGKDIAQVIQEKTTIYRTNFSICLMLGIAYSASIGSLGTLIGTPPNALLAGYMKTAFNIEIDFAQWMVFGTPLAFIMLILAWLLLTYVIFPLKIKEIPGGKEVVKSELKKLRRLSQAEISVGVIFILASLGWIFLDTILKSWGIKIDKIDSVIAMGVSALLFILPANHQGDRLIDWG-VAKKLPWDVLLLFGGGLALSAQFSKTGLSLWIGHLVSGF-SHLPILFIIVMVTLMVIFLTEITSNTATAAAFLPVIGGVAMGMGYESHQSLLLTIPVALSATCAFMLPVATPPNAIAYGSGYVKITDMIKAGLWLNLVGVVLISAFSYCLVSLIFN |
| 4F35 Chain:D ((23-442)) | --------------------------------------------------------YHFLPFEHNVVLGISMLAFIAVLWLTEALHVTVTAILVPVMAVFFGIFETQAALNNFANSIIFLFLGGFALAAAMHHQGLDKVIADKVLAMAQGKMSVAVFMLFGVTALLSMWISNTATAAMM-------LPLVLGVLSKVDADK------------------------------QRSTYVF-------VLLGVAYSASIGGIATLVGSPPNAIAAA------EVGLSFTDWMKFGLPTAMMMLPMAIAILYFLL--------------VNWDKGKVVTLG--------IFGLTVFLWIFSSPINAALG-GFKSFDTLVALG--AILMLSFA-----RVVHWKEIQKTADWGVLLLFGGGLCLSNVLKQTGTSVFLANALSDMVSHMGIFVVILVVATFVVFLTEFASNTASAALLIPVFATVAEAFGMSP---VLLSVLIAVAASCAFMLPVATPPNAIVFASGHIKQSEMMRVGLYLNIACIGLLTAIAMLFWQ---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4F35.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -468083 for 3570 contacts (-131.1/contact) +
2D Compatibility (PS) -40584 + (NN) -8181 + (LL) 10216
1D Compatibility (HY) -53200 + (ID) 8150
Total energy: -567982.0 ( -159.10 by residue)
QMean score : 0.388
|
|
|