Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLEKIQKEWLSNIQKDLLSGFVVGLSVIPETAGFAIMVGLDVGVAFYTTFYMAFVLSLFGARKAMISAAAGSVALILVGVVKNYGLEYAGVATLMAGILQILLGYLKIGNLLKFIPQSVMYGFVNALGILLLTEQFKFLQNQNLGVFVLLAIGILIIYLFPLITKKIPSNLICILAVSAIALIFDTHAPNLGSIEQGVSGF-HFIIIPKNLDFKMVLGLLPYALSLALVGTIESLLTAKTLDVILKDGVSDKNKETKAQGLGNIISGLLGGMTGCALVGQSIINAKSGAKTRLSTFFAGFSLMVLILVFNEYVVKIPIVAVVAVMVIISFTTFNFQSIMNIKTIKLYDTLNMLLVVAVVLYTHNLAIGVVVGVLINALWIKFKGMG------------------------------------------------------------------------------------------- |
| 5DA0 Chain:A ((14-484)) | -----QREWFANPRKDVLAGIVVALALIPEAIAFSIIAGVDPQVGLYASFIIALITAFLGGRPGMISAATGAMALLMTGLVKDHGIQYLFAATVLTGVLQVVFGWAKLARYLKFVPRSVMVGFVNALAILIFMAQLPQFVGANWQMYAMVAAGLAIIYLLPLVFKAMPSALVAIVVLTVVAVVTGADVKTVGDMGTLPTALPHFQFPQVPLTFETLAIIFPVALTLSLVGLLESLLTAQLIDER-TDTTSDKNVESRGQGVANIVTGFFGGMAGCAMIGQSMINVTSGGRGRLSTFVAGAFLMVLILALQPLLVQIPMAALVAVMMVVAISTFDWGSL----RFPKGETVVMLATVAVTVFTHDLSLGVLIGVVLSALFFARKVSQLSQVTPVDEVDGTRTYRVRGQLFFVSTHDFLHQFDFTHPARRVVIDLSDAHFWDGSAVGALDKVMLKFMRQGTSVELRGLNAASATLVERL |
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General information:
TITO was launched using:
| RESULT:
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Template: 5DA0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -377261 for 3358 contacts (-112.3/contact) +
2D Compatibility (PS) -38346 + (NN) -14323 + (LL) 1328
1D Compatibility (HY) -49600 + (ID) 7900
Total energy: -486102.0 ( -144.76 by residue)
QMean score : 0.383
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