Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIIIPARLKSSRFENKMLEDIFGLPMVVRCAKNA--NLVDECVVACDDESIMKACQKFHIKAVLTSKHHNSGTERCLEAAQILGLKNDERVLNLQGDEPFLEKKVI--LALLEATQNAPFMATCAKVIDEEQAK-SPNLVKVVLDSQNNALYFSRSLIPFLRDFDAKRQ------TPLLGHIGIYGFHNKEILEELCALKPCVLEDTEKLEQLRALYYQKKILVKIVQSESM-GIDTKEDLQNALKIFSPNLLKR
4XWI Chain:A ((15-261))
-VVIPARYASTRLPGKPLQDIAGQPMIQRVWNQARKSAASRVVVATDDERILAACQGFGAEALLTRAEHNSGTDRLEEVASRLGLASDAIVVNVQGDEPLIPPALIDQVAANLAAHPEAAIATLAEPIHEVSALFNPNVVKVATDIDGLALTFSRAPLPWARDAFARDRDSLPEGVPYRRHIGIYAYRVG-FLADFVAWGPCWLENAESLEQLRALWHGVRIHVADARENMLPGVDTPEDLERVRRVLGG-----
General information:
TITO was launched using:
RESULT:
Template:
4XWI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -134728 for 1857 contacts (-72.6/contact) +
2D Compatibility (PS) -25667 + (NN) -12702 + (LL) 508
1D Compatibility (HY) -15200 + (ID) 5000
Total energy: -192789.0 ( -103.82 by residue)
QMean score : 0.513
(partial model without unconserved sides chains):
PDB file :
Tito_4XWI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4XWI-query.scw
PDB file :
Tito_Scwrl_4XWI.pdb
: