Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKF-ASVLVQLKTLALEKIERKLESKRLELQQNEREVLDKQAQLSAFK----NPELGGMSLFLQTQQLKSALRMEIEYYQQEGENLTKDLKILEKDYLLANQELEKAKIILEKEKQKEKEILEKKEQALLDENAMILHWQKGGLHA
3AJW Chain:A ((6-141))
-QHGALETLKDLAEKEVDDAARLLGEMRRGCQQAEEQLKMLIDYQNEYRSNLNMGNGIASNRWINYQQFIQTLEKAIEQHRLQLTQWTQKVDLALKSWREKKQRLQAWQTLQDRQTAAALLAENRMDQKKMDEFA------------
General information:
TITO was launched using:
RESULT:
Template:
3AJW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 38183 for 700 contacts (54.5/contact) +
2D Compatibility (PS) -15174 + (NN) -17342 + (LL) 1200
1D Compatibility (HY) 1200 + (ID) 1050
Total energy: 7017.0 ( 10.02 by residue)
QMean score : 0.620
(partial model without unconserved sides chains):
PDB file :
Tito_3AJW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3AJW-query.scw
PDB file :
Tito_Scwrl_3AJW.pdb
: