Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFDNTLINLFETAPLLTSLLAGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGFSLVFLGVGMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFAFLYKTQSVGLASKSNSMQRFYPFLLGMSFALGWTP----------CIGPIFTSIVIMSASKDAYGLMLMVVFVMGLAIPFLLVALMLERALLFLKSLRKYNRAIEIVSGLVLILMGILIMTNSLESLTNFLQN |
4C0E Chain:A ((200-266)) | -----------------------------------------------------------------------------------------------------------------------------------SHRAFLPVILGLPDEKGWAPFTKLLEQFLGCVGELVKTFTVSSLGKEMYHAALKILIVLQHDFPIYLDKFRVQLCQSLPLHATQLVNLILAAIPPNCNSLADPFQAGLKVDKIPDMKE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C0E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -39897 for 288 contacts (-138.5/contact) +
2D Compatibility (PS) -5291 + (NN) 2117 + (LL) 10664
1D Compatibility (HY) -6000 + (ID) 850
Total energy: -39257.0 ( -136.31 by residue)
QMean score : 0.024
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