Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLKFFRKNIVLKVVPRLAFGVLWLLHKTCKNRYFLAQDLKEKPFIVSCWHGELGMIGFAYLRLQKPSVYVIASQHFDGSIAAGLFESFGFKNIRGSSKKGGVKVLIEGLKRLKEGCDVAITPDGPKGPRHSIADGVIALAQKSGVGISACRVVCKNAWRLNTWDQFEIPKPFSEVRYYMLESVIIPKEWELSKAKEYLKTRMDSVGFEESQRGLGA |
| 3BGZ Chain:A ((176-224)) | ---------------------------RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT----DFDGT----------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3BGZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -11697 for 235 contacts (-49.8/contact) +
2D Compatibility (PS) -4891 + (NN) -218 + (LL) 11720
1D Compatibility (HY) -4400 + (ID) 850
Total energy: -10336.0 ( -43.98 by residue)
QMean score : -0.088
|
|
|